Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903933.1_cds_XP_016454107.1_48165
CDS Infomation

[gene=LOC107778372] [db_xref=GeneID:107778372] [protein=tetrahydrocannabinolic acid synthase-like] [protein_id=XP_016454107.1] [location=complement(3377..4861)] [gbkey=CDS]
Sequence

ATGACTCTTCACTCTATTTCAATTGTTCACTCCCAAGGATCTTTTTCATATACATATCTT
TTACAAGCAGCTGAACAAAATCCAAGATGGTTAAACTCAACATCACTACTTAAACCACCA
TTCATAGTAACACCAAAGACACAAAATGAAATCCAATTAGCCATTCTTTGTAGCAAGAAG
CATGCTTTACAAGTTAGAGTAAAGAGTGGAGGTCATGATTATGAAGGCCTATCTTTTCTT
TGCAAAACCCCTTTCGTAATCTTTGATTTAGTCGATTTTCGATCAATTAGCATCAATTTA
GAAGATGAAACTGCTTGGATTCAAGCTGGTGCAACCATTGGAGAATTTTACTATAACATA
GCCAAGAAAAGTGACATTCTTGGATTTCCTTCTGGCCTATGCCCAAGTGTTGGTGTTGGT
GGGCTCTTTAGTGGAGGTGGCATTGGCACTATGATGAGAAAATATGACCTCTCTGCTGAT
AATATAATAGATGCCAATTTGGTTGATGCCAATGGTAGAATTCTTAATAGAGAAACAATG
GGAGAAGATGTATTTTGGGCAATTAGAGGTGGTGGAGGAGCTAGTTTTGGAGTAATAACA
GCCTGGAAAGTGAAGCTGGTTCGCGTTCCACCCCTTGTCACAGTTTTCACAATTCACAAG
AGTTTAGACCAAGAAGGTGTCAAACTTGTCCATAAATGGCAGTATTTAGCCAGTAAACTA
CCCGGGAGTCTCTTCATCCGAGTCATTATTCAACAAATCGATGGACCTGATAGCCATGGA
AACGCGAAGCCAGCGGAACTCTTGTTCAATTCCCTATTTTTAGGACTGAGAACTGACCTG
GTTTCTATCATGAACAGGAGCTTCCCTGACTTAGGCTTGAAAATGGAAGATTGCGCGGAG
ATGAGCTGGATAAAGTCCGTTCTTTACTTCACAGGCTACGAAAAAGGGGAGCCATTAGAA
GTCCTGTTGGATAGGAAAACACAGTACAAGAGCAACTTCAAGGGAAAATCAGATTTCGTC
GTTGAGCCAATCCCAGAAAGTGTTTTCCAGGGGATCTCAGAGAGATTTTTGCACCAAAAG
TTGGCTTTCATGATATTGGATCCTTTAGGAGGGAAAATGGATGAAATTTCTGAATCTGAA
ATACCATTTCCTCATAGGAAAGGGAACCTATACAACATACAATACATAGTGAAATGGGAT
TCAAATGATATGTTGGCATCCCAACAGCCCTTGTATTGGATGCAAAGGCTTTACAAGTAC
ATGGAACCATATGTGTCCAAGTCACCAAGAACTGCTTATATCAATTATAGGGATCTTGAT
TTGGGAATCAATCAGCAGGGAAATTACTCAAGCTATCGACAAGCTCTGACTTGGGGTACG
AAGTACTTCAAAGGTAATTTTCAAAGATTGGCAAGAGCTAAGCATCAGATTGATCCGAGC
AACTTTTTCACAAATGAACAAAGCATTCCTCCTCTTTCTTGTTAG

Peptide Sequence

PEP ID

XP_016454107.1
PEP Infomation

PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana tabacum]
Sequence

MTLHSISIVHSQGSFSYTYLLQAAEQNPRWLNSTSLLKPPFIVTPKTQNEIQLAILCSKK
HALQVRVKSGGHDYEGLSFLCKTPFVIFDLVDFRSISINLEDETAWIQAGATIGEFYYNI
AKKSDILGFPSGLCPSVGVGGLFSGGGIGTMMRKYDLSADNIIDANLVDANGRILNRETM
GEDVFWAIRGGGGASFGVITAWKVKLVRVPPLVTVFTIHKSLDQEGVKLVHKWQYLASKL
PGSLFIRVIIQQIDGPDSHGNAKPAELLFNSLFLGLRTDLVSIMNRSFPDLGLKMEDCAE
MSWIKSVLYFTGYEKGEPLEVLLDRKTQYKSNFKGKSDFVVEPIPESVFQGISERFLHQK
LAFMILDPLGGKMDEISESEIPFPHRKGNLYNIQYIVKWDSNDMLASQQPLYWMQRLYKY
MEPYVSKSPRTAYINYRDLDLGINQQGNYSSYRQALTWGTKYFKGNFQRLARAKHQIDPS
NFFTNEQSIPPLSC

Transcript Sequence

Gene sequence data has not been registered.